Academic Publishing Blog Research integrity

How Andrea Cerutti molested and defiled Journal of Immunology

Spain is where dishonest research gets rewarded, with awards, grants and media fame. No wonder the New York-based immunologist Andrea Cerutti opened a second lab in Barcelona.

Spanish science transitioned from being a provincial swamp of ignorant nepotism under Franco’s fascist dictatorship to an elitist swamp of arrogant nepotism with a choke-hold on European and international research funds. Young researchers, who once returned from abroad to reform the country’s bogged-down scientific system, have grown into the provincial greedy power-clutching tyrants they have dethroned. Faculty jobs once given to family members, now go to loyal members of your scientific family. Another difference: the new science oligarchs are international and speak more languages than just the local Spanish dialect. Some are even foreigners, like the Italians Maria Pia Cosma, or the central character of this story, Andrea Cerutti. One bizarre relic which remained: the fundamentalist Catholic order Opus Dei still seems to have its hand in Spanish academia, as the recent affair around Carlos Lopez-Otin revealed (see this article and especially the comment section). In the 1980ies, one Spanish medical fraudster saved his career by joining Opus Dei, he even underwent exorcism to expel the devil which made him commit research misconduct. Who knows if this still happens.

Many countries have a problem with cheaters in science, but in Spain those cheaters are celebrated, awarded with highest honours and biggest public and industrial grants. Spanish media seems to know its place and applauds each award to a dishonest data manipulator as if nothing was out of order. Lopez-Otin is back from his Paris exile to the University of Oviedo now, he wrote a book about his Passion, and he will very likely soon get the Princess of Asturias Prize he craves so much. 

The whole conspiracy farce around his 9 retractions, which culminated with an El Pais article showing Lopez-Otin with a 23-year-old progeria patient sitting on his lap wearing an Opus Dei crucifix, made one thing clear: any Spanish scientist opening their mouth about research integrity will be burnt at stake. Cancer and degenerative diseases are to be cured with massive investments into aggressive Photoshop fraud, Spanish elites of society have agreed. 

Here are some other examples of the bizarre cult of scientific dishonesty in Spanish academia:

Recently, certain French and Spanish newspapers established that I am a German racist, a terrorist, and a harasser of women in science, further facts in that regard were extensively elaborated on Twitter. 

In this regard, I will bring here a story about an Italian haematology and immunology researcher, Andrea Cerutti*, who holds transatlantic labs at Institut Hospital del Mar d’Investigacions Mèdiques (IMIM) in Barcelona, Spain, and at Icahn School of Medicine at Mount Sinai, New York, USA. Until recently, Cerutti used to swim in grant money, from 2011 to 2016 the Mount Sinai lab received from NIH $5 million for 4 projects, while the Barcelona lab frolicked from 2012 to 2017 in the €2.2 million ERC grant.

the graduates

I was alerted to the Cerutti case by the pseudonymous image integrity sleuth Clare Francis, who found recent irregularities in Cerutti’s papers, next to the already impressive PubPeer record. Like this, in Sintes et al Nature Communications 2017: it shares gel bands with a four year older paper from Cerutti lab in New York, Romberg et al J Clinical Investigation 2013.

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It is strange why same old blot from 2013 was rearranged so creatively in 2017, with same bands standing in for such diverse samples. Some might say, it was merely a loading control, but I personally feel those are kind of important and should not be faked. But again, others on Twitter proved me wrong, especially in this case.

In 2016, Cerutti had to correct a 10-year-old Qiao et al Nature Immunology 2006 paper, because of a palindromic gel, after evidence was posted on PubPeer:

The correction from summer 2016 went:

“In the version of the article originally published, in the top immunoblot (loading control) in Figure 5f, the right half was incorrectly a mirror-image duplication of the left half. The correct immunoblot from a replicate experiment is now presented (along with the corresponding bottom immunoblot).”

How can that kind of mirroring happen by mistake? It can’t, but do you think the publisher Nature used the occasion to screen the paper for other Easter eggs? Apparently not, but others did and posted it on PubPeer, the problem with Figure 2b already in October 2016:

Did Nature Immunology do anything about this new evidence of manipulated gels? No, the case was apparently closed. Maybe the journal was so shocked by what Cerutti is capable of, they decided not to mess with that immunologist from Photoshop hell. Because Cerutti also published this: He et al, Nature Immunology 2010:

One interesting collaborator of Cerutti’s is the fellow immunologist Paolo Casali, a compatriot from Italy and Cerutti’s former mentor from their common time back at Weill Medical College of Cornell University. Cerutti used to work in Casali’s lab from 1997 till 2003 when the latter left Weill Cornell for California, and then for the University of Texas in San Antonio, USA, where Casali is now Chair of Department of Microbiology. Cerutti stayed at Weill Cornell till 2009, the year when, according to this CV, the Italian blot fabricator was granted tenure. For some reason, Cerutti instead buggered off to Mount Sinai in New York. During that period, Cerutti and Casali polluted scientific literature with some highly toxic material. For example, they honoured Nature Immunology with this interesting collage in Cerutti et al 2001:

Not just that the pair of IgBeta bands are duplicated, one band makes an extra appearance in the gel below. It was obviously copy-pasted, just like its neighbours. The Italian couple published together also such Photoshop masterpieces like Zan et al J Immunology 2000 or Cerutti et al J Immunology 2002:

Or this Cerutti-Casali copro-duction, in the same journal, Litinskiy et al J Immunology 2002, with Cerutti as last author:

The poor Journal of Immunology, where Cerutti used to be associate editor until 2008, and which is published by The American Association of Immunologists of which Cerutti is a proud member. This appeared in He et al J Immunology 2004, last author Cerutti, just one of several manipulated figures in this paper:

imgur-ae0s7kw.jpg

Two years later, He et al J Immunology 2006, again from Cerutti lab in Cornell, and next to cloned gel bands there are also cloned FACS plots in that paper:

The following shows apparently how Cerutti and Casali started, back in 1998 there was not much Photoshop yet, you had to play glue, scissors, paper to get the right scientific result. A vintage artwork, from the olden times, Zan et al J Immunology 1998:

It is not like Cerutti stopped doing those naughty deeds once a successful academic career was fully established. It’s like with alcoholics, the temptation for recidivism is too strong and lurking everywhere. There are also these collaborative papers by Cerutti where same flow cytometry file appears twice. Examples are here, a paper from Cerutti’s collaborators at Karolinska Institutet in Stockholm, Sweden (Gutzeit et al J Immunology 2014) and at Icahn School of Medicine (Garcia-Carmona et al Frontiers in Immunology 2018). Duplicated flow cytometry (FACS) plots are labelled with colour squares.

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This might have been an honest mistake of oversight, but how come the quantified numbers are different? This means either the authors did it to obscure similarities, or they secretly changed measurement gates on each file to get the results they wanted (like Sonia Melo proudly admitted to having done). Neither constitutes good scientific practice. Cerutti actually published something similar with Casali before, guess where: Xu et al J Immunology 2008.

There is more material on PubPeer, but in Spain, its serves as a badge of honour, if anything.

*Andrea is a male name in Italy, but I don’t want to spoil the “harasser of women in STEM” story told about me online and offline. Also, I don’t want to miss the precious irony of Andrea Cerutti being possibly defended as a MeToo victim of harassment. 


 

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112 comments on “How Andrea Cerutti molested and defiled Journal of Immunology

  1. Zebedee's avatar

    J Biol Chem. 1997 Oct 10;272(41):25863-72.
    Differential interaction of the cyclin-dependent kinase (Cdk) inhibitor p27Kip1 with cyclin A-Cdk2 and cyclin D2-Cdk4.
    Blain SW1, Montalvo E, Massagué J.
    Author information
    1
    Cell Biology Program and Howard Hughes Medical Institute, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA.

    Figure 1e. Much more similar than you would expect.

    Figure 2c. Much more similar than you would expect.

    https://pubpeer.com/publications/8507E12CC66CA1F853B1F05F139BFB#3

    Like

  2. Zebedee's avatar

    Genes Dev. 1995 Aug 1;9(15):1831-45.
    Kip/Cip and Ink4 Cdk inhibitors cooperate to induce cell cycle arrest in response to TGF-beta.
    Reynisdóttir I1, Polyak K, Iavarone A, Massagué J.
    Author information
    1
    Cell Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA.

    Figure 1A. Much more similar than you would expect.

    https://scienceintegritydigest.com/2020/01/08/oops-i-did-it-again/

    “Category I duplications: simple, identical duplications.
    Category II duplications: duplications involving shift, rotation, or a flip.
    Category III duplications: parts within the same panel are duplicated or parts from other panels are duplicated into another panel.
    Category I is the most likely to be the result of an honest error, while Category III is really hard to explain by an honest error and the most likely to be done intentionally.”

    According to the Elisabeth Bik scale of image duplication the example above would fit Category III.

    Like

  3. Zebedee's avatar

    Kung Fu fighting (Photoshop) gives you that edge. Those kids were fast as lightning.

    Like

    • NMH's avatar

      and its done with expert timing…meaning, you do it when you are working for a famous person as a post-doc to get that boost for a faculty position. woo-hoo-a-hoooo….chop.

      Like

  4. Zebedee's avatar

    Cancer Cell. 2004 Jul;6(1):17-32.
    Molecular characterization of the tumor microenvironment in breast cancer.
    Allinen M1, Beroukhim R, Cai L, Brennan C, Lahti-Domenici J, Huang H, Porter D, Hu M, Chin L, Richardson A, Schnitt S, Sellers WR, Polyak K.
    Author information
    1
    Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.

    Figure 1B. Much more similar than you would expect.

    Like

  5. Zebedee's avatar

    PLoS One. 2008 Mar 5;3(3):e1741. doi: 10.1371/journal.pone.0001741.S100A7-downregulation inhibits epidermal growth factor-induced signaling in breast cancer cells and blocks osteoclast formation.Paruchuri V1, Prasad A, McHugh K, Bhat HK, Polyak K, Ganju RK.Author information1Division of Experimental Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA.

    Figure 3. Much more similar than you would expect.

    Like

  6. Zebedee's avatar

    “Icahn School of Medicine (Garcia-Carmona et al Frontiers in Immunology 2018). ”

    Front Immunol. 2018 Oct 2;9:2125. doi: 10.3389/fimmu.2018.02125. eCollection 2018.
    TACI Isoforms Regulate Ligand Binding and Receptor Function.
    Garcia-Carmona Y1, Ting AT1, Radigan L1, Athuluri Divakar SK2, Chavez J1, Meffre E3, Cerutti A1,4,5, Cunningham-Rundles C1,6.
    Author information
    1
    Department of Clinical Immunology, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
    2
    Department of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
    3
    Department of Immunobiology, Yale University School of Medicine, New Haven, CT, United States.
    4
    Catalan Institute for Research and Advance Studies (ICREA), Barcelona, Spain.
    5
    Program for Inflammatory and Cardiovascular Disorders, Institut Hospital del Mar d’Investigacions Mèdiques (IMIM), Barcelona, Spain.
    6
    Department of Medicine and Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, United States.

    December 2019 correction.
    https://www.frontiersin.org/articles/10.3389/fimmu.2019.02772/full

    In the original article, there was a mistake in Figure 1A and Figure 2A as published. In Figure 1A, two panels of the 12 panels were mistakenly duplicated; in Figure 2A, one panel of the 12 panels was also duplicated. The numbers given are correct. The corrected Figure 1, Figure 2 and legends appear below.

    Like

  7. Zebedee's avatar

    Dean and medical provost Weill Cornell Medical School.
    http://pre.weill.cornell.edu/about-us/dean/dean-augustine-mk-choi.html

    “… in 2000 he became chief of the division of pulmonary, allergy and critical care medicine at the University of Pittsburgh. In 2007 he was appointed the Parker B. Francis Professor of Medicine at Harvard Medical School and chief of pulmonary and critical care medicine at Brigham and Women’s Hospital.”

    Data in Am J Physiol Lung Cell Mol Physiol. 2003 Jan;284(1):L50-6 from Am J Respir Cell Mol Biol . 2002 Nov;27(5):603-10.

    Figure 4. Much more similar than expected (blue rectangles). The differences (red rectangles) in Am J Physiol Lung Cell Mol Physiol . 2003 Jan;284(1):L50-6 are difficult to explain as the control panels are the same as in the earlier paper.

    Figure 6C. Much more similar and different than expected.

    Am J Physiol Lung Cell Mol Physiol. 2003 Jan;284(1):L50-6. doi: 10.1152/ajplung.00212.2002. Epub 2002 Aug 23.
    Regulation of IL-1beta -induced GM-CSF production in human airway smooth muscle cells by carbon monoxide
    Ruiping Song 1, Wen Ning, Fang Liu, Bill T Ameredes, William J Calhoun, Leo E Otterbein, Augustine M K Choi
    Affiliation
    1Department of Medicine, Division of Pulmonary, Allergy, and Critical Care Medicine, University of Pittsburgh School of Medicine, 3459 5th Avenue, Pittsburgh, PA 15213, USA.

    Am J Respir Cell Mol Biol. 2002 Nov;27(5):603-10. doi: 10.1165/rcmb.4851.
    Carbon monoxide inhibits human airway smooth muscle cell proliferation via mitogen-activated protein kinase pathway
    Ruiping Song 1, Raja S Mahidhara, Fang Liu, Wen Ning, Leo E Otterbein, Augustine M K Choi
    Affiliation
    1Division of Pulmonary, Allergy and Critical Care Medicine, University of Pittsburgh School of Medicine, Pennsylvania 15213, US

    Like

    • Zebedee's avatar

      Same Augustine Choi present Dean Weill Cornell Medical School.

      Am J Respir Cell Mol Biol. 2002 Nov;27(5):603-10. doi: 10.1165/rcmb.4851.
      Carbon monoxide inhibits human airway smooth muscle cell proliferation via mitogen-activated protein kinase pathway
      Ruiping Song 1, Raja S Mahidhara, Fang Liu, Wen Ning, Leo E Otterbein, Augustine M K Choi
      Affiliations collapse
      Affiliation
      1Division of Pulmonary, Allergy and Critical Care Medicine, University of Pittsburgh School of Medicine, Pennsylvania 15213, USA.

      Figure 5 and 6. Much more similar than expected.

      .

      Like

      • Zebedee's avatar

        Same Augustine Choi present Dean Weill Cornell Medical School.

        Am J Respir Cell Mol Biol. 2002 Nov;27(5):603-10. doi: 10.1165/rcmb.4851.

        Figure 4B. Much more similar than expected.

        Like

    • Zebedee's avatar

      18 Dec 2020 retraction for:

      Regulation of IL-1beta -induced GM-CSF production in human airway smooth muscle cells by carbon monoxide.
      Song R, Ning W, Liu F, Ameredes BT, Calhoun WJ, Otterbein LE, Choi AM.
      Am J Physiol Lung Cell Mol Physiol. 2003 Jan;284(1):L50-6. doi: 10.1152/ajplung.00212.2002. Epub 2002 Aug 23.
      PMID: 12388337

      Retraction notice.
      https://journals.physiology.org/doi/full/10.1152/ajplung.00212.2002_RET

      “The American Physiological Society is retracting this article due to inclusion of data in Figure 4A that were published previously in Figures 5 and 6 of the article “Carbon Monoxide Inhibits Human Airway Smooth Muscle Cell Proliferation via Mitogen-Activated Protein Kinase Pathway” (https://doi.org/10.1165/rcmb.4851) and represent different results. Due to the length of time since initial publication, the authors were unable to provide original captures for these experiments to resolve the concerns.”

      Like

  8. Zebedee's avatar

    Same Augustine Choi present Dean Weill Cornell Medical School.
    http://pre.weill.cornell.edu/about-us/dean/dean-augustine-mk-choi.html
    ” After completing his internship and residency in internal medicine at Duke and a fellowship in pulmonary and critical care medicine at Johns Hopkins, he began his academic career in 1990 in the division of pulmonary and critical care medicine at Johns Hopkins.”

    Stimulation of pro-α1(I) collagen by TGF-β1 in mesangial cells: role of the p38 MAPK pathway
    Beek Yoke Chin, Amir Mohsenin, Su Xia Li, Augustine M. K. Choi, and Mary E. Choi
    01 MAR 2001https://doi.org/10.1152/ajprenal.2001.280.3.F495
    Affiliation
    1Toxicological Sciences, Environmental Health Sciences, The Johns Hopkins Medical Institutions, Baltimore, Maryland 21205, USA.

    Figure 5. Much more similar than expected.

    Figure 9. Much more similar than expected.

    Like

  9. Zebedee's avatar

    Dean and medical provost Weill Cornell Medical School.
    http://pre.weill.cornell.edu/about-us/dean/dean-augustine-mk-choi.html

    Proc Natl Acad Sci U S A2005. Aug 9;102(32):11319-24. doi: 10.1073/pnas.0501345102. Epub 2005 Jul 28.
    Caveolin-1 expression by means of p38beta mitogen-activated protein kinase mediates the antiproliferative effect of carbon monoxide
    Hong Pyo Kim 1, Xue Wang, Atsunori Nakao, Sung Il Kim, Noriko Murase, Mary E Choi, Stefan W Ryter, Augustine M K Choi
    Affiliations collapse
    Affiliation
    1Division of Pulmonary, Allergy, and Critical Care Medicine, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.

    Figure 6D. Splice in one panel, no splice in the other panel. It is a western blot (solid support) splicing is problematic.

    Like

  10. Zebedee's avatar

    J Biol Chem. 1999 Apr 16;274(16):11362-8. doi: 10.1074/jbc.274.16.11362.
    Transforming growth factor beta1 rescues serum deprivation-induced apoptosis via the mitogen-activated protein kinase (MAPK) pathway in macrophagesB Y Chin 1, I Petrache, A M Choi, M E ChoiAffiliation1Toxicological Sciences, Environmental Health Sciences, The Johns Hopkins Medical Institutions, Baltimore, Maryland 21205, USA.

    Problematic data figure 5B.Figure 5B. No background, and rightmost 2 bands very similar.

    Like

  11. Zebedee's avatar

    Considering the papers by Augustine Choi above what a laugh! What will be his specialist subject?

    Acad Med. 2019 May;94(5):630-633. doi: 10.1097/ACM.0000000000002498.
    Developing a Culture of Mentorship to Strengthen Academic Medical Centers
    Augustine M K Choi 1, Jennifer E Moon, Ann Steinecke, John E Prescott
    Affiliations collapse
    Affiliation
    1A.M.K. Choi is Stephen and Suzanne Weiss Dean, Weill Cornell Medicine, and provost for medical affairs, Cornell University, New York, New York. J.E. Moon is director, Dean’s Office Initiatives, Weill Cornell Medicine, New York, New York. A. Steinecke is senior director, Academic Affairs Programs and Engagement, Association of American Medical Colleges, Washington, DC. J.E. Prescott is chief academic officer, Association of American Medical Colleges, Washington, DC.
    PMID: 31026234 PMCID: PMC6493700 DOI: 10.1097/ACM.0000000000002498
    Free PMC article
    Abstract
    Mentorship is central to academic medicine and its missions, and it has long played a critical role in the training and career development of physicians and scientists. A growing body of literature has documented the positive impact of mentorship on various outcomes, including research productivity, academic promotion, faculty retention, and career satisfaction. These benefits span academic medical centers’ missions and have the potential to enhance biomedical research, patient care, education, and faculty diversity and leadership.In this Invited Commentary, the authors argue that a dynamic culture of mentorship is essential to the success of academic medical centers and should be elevated to the level of a major strategic priority. This culture of mentorship would capitalize on an institution’s intellectual resources and seek to develop leaders in biomedical discovery, patient care, and education. The bidirectional transmission of knowledge between mentors and mentees, through both formal programs and informal relationships, can foster the growth of faculty members needed to meet the complex challenges currently confronting medical schools and teaching hospitals.Developing a culture of mentorship requires a strong commitment by leaders at all levels to nurture the next generation of physicians and scientists as well as grassroots efforts by trainees and faculty to seek out and create mentorship opportunities. The authors conclude by outlining possible mechanisms and incentives for elevating mentorship to the level of a strategic priority to strengthen academic medical centers across their missions.

    Like

    • NMH's avatar

      I really think medical school profs (I work for one) live in a “competency bubble”. They think of themselves very highly as research clinicians, who can do it all: teaching, admin, and having an active and productive lab creating quality papers. In the end, they probably will slack off on the lab responsibilities but their egos will insist on being seen as competent and productive, and the poor bastards generating the data will do as needed to keep their crappy jobs and fuflill the MD egos. Its pathetic. MD’s are not the superhuman gods they like to think of themselves to be.

      Like

  12. Zebedee's avatar

    Am J Respir Crit Care Med. 2004 Sep 15;170(6):613-20. doi: 10.1164/rccm.200401-023OC. Epub 2004 May 13. Inhaled carbon monoxide confers antiinflammatory effects against ventilator-induced lung injury
    Tamás Dolinay 1, Mária Szilasi, Mingyao Liu, Augustine M K Choi

    Affiliation
    1Division of Pulmonary, Allergy, and Critical Care Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, USA.

    Figure 7. Where are differences?

    Like

  13. Zebedee's avatar

    Same Augustine Choi present Dean Weill Cornell Medical School.
    http://pre.weill.cornell.edu/about-us/dean/dean-augustine-mk-choi.html

    Med Gas Res. 2011 May 18;1(1):8. doi: 10.1186/2045-9912-1-8.
    Carbon monoxide inhibits Fas activating antibody-induced apoptosis in endothelial cells
    Xue Wang 1, Yong Wang, Seon-Jin Lee, Hong Pyo Kim, Augustine Mk Choi, Stefan W Ryter
    Affiliations collapse
    Affiliation
    1Pulmonary and Critical Care Medicine, Brigham and Women’s Hospital, Harvard Medical School, 75 Francis Street, Boston, MA, 02115, USA. sryter@partners.org

    https://pubpeer.com/publications/5D177133C7098B90006FDC2375F160

    Figure 1. Much more similar than expected

    https://imgur.com/9crHNHn

    Figure 2B. Much more similar than expected.

    https://imgur.com/vF8v4NF

    https://imgur.com/BVywkLb

    Figure 4. Much more similar than expected.

    https://imgur.com/P1ElRhd

    Like

  14. Zebedee's avatar

    Same Augustine Choi present Dean Weill Cornell Medical School.
    http://pre.weill.cornell.edu/about-us/dean/dean-augustine-mk-choi.html

    J Biol Chem. 2004 Feb 13;279(7):5237-43. doi: 10.1074/jbc.M309271200. Epub 2003 Nov 18.
    Hepatocyte growth factor protects against hypoxia/reoxygenation-induced apoptosis in endothelial cells
    Xue Wang 1, Yushen Zhou, Hong Pyo Kim, Ruiping Song, Reza Zarnegar, Stefan W Ryter, Augustine M K Choi

    Affiliation
    1Division of Pulmonary, Allergy and Critical Care Medicine, Department of Medicine, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania 15213, USA.

    Figures 2B and 4E. FLIP panels much more similar than you would expect, although the reoxygenation timings are different

    https://pubpeer.com/publications/C216E6755D079B759A35E1A6BC94F2

    Like

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