Karolinska requests retraction of Macchiarini and Jungebluth papers

Karolinska requests retraction of Macchiarini and Jungebluth papers

Today the Swedish Karolinska Institutet (KI) will announce its decision about 6 papers of their former professor and surgeon, Paolo Macchiarini. This article will be updated accordingly. Update 14:00: a decision was published, all 6 papers are to be retracted, 7 scientists found guilty of misconduct.

The background: On 30 October 2017, Swedish Central Ethics Review Board (CEPN) requested that 6 publications by Macchiarini and co-authors, all authored while at KI, are to be retracted, in a press release and a statement I received, in English original. The decision was based on the expert review by Martin Björck, professor of surgery at University of Uppsala, and Detlev Ganten, professor emeritus of pharmacology and former CEO of the Charité university hospital in Berlin, Germany, their report is available here on my site. The two experts found Macchiarini and his former acolyte and right-hand man Philipp Jungebluth guilty of breaching the Nuremberg Code of 1947 and Helsinki declaration, which forbid unethical and dangerous medical research on humans. One of those papers set for retraction is Jungebluth et al Lancet 2011, where a patient from Iceland was tricked to subject himself to a deadly experiment with a never before tested plastic trachea (that issue lead to a major investigation in Iceland and now is even about to be addressed by the Icelandic parliament).

Judging from last week’s email by Jungebluth to KI which I quote below, a call for retraction is expected.

Continue reading “Karolinska requests retraction of Macchiarini and Jungebluth papers”

Jessus investigator identity leaked, CNRS President to expose whistleblowers

Jessus investigator identity leaked, CNRS President to expose whistleblowers

An update to the ongoing cartoon Stalinism propaganda and purge activities at the EU largest research institution, the French CNRS, in the wake of the affair around manipulated data of CNRS chief biologist Catherine Jessus, according to their press release an innocent “victim” of my “slanderous” and “unscientific” blogging.  First of all, a reliable source forwarded to me information from inside CNRS who one of the anonymous investigators was: Francis-André Wollman, CNRS researcher and professor at Jessus’s university UPMC (now Sorbonne University) in Paris. Wollmann is plant cell biologist, specialising in chloroplasts, the technology of western blot is standard in his lab. He did not reply to my emails, also the CNRS and Sorbonne University press speakers chose not to deny his role as anonymous Jessus investigator. The experts namely declared western blot manipulation to be good scientific practice, and lashed out at those who have a problem with copy-pasted gel bands (read here).

Then, the new CNRS President Antoine Petit, who replaced interim president Anne Peyroche (deposed after my reporting about data manipulations in her papers) proved to be not really a reformer, quite the opposite. Petit approved the new definition of what research misconduct in biology is, following cues from Sorbonne University and its president Jean Chambaz (who is cell biologist, specialising on intestinal metabolism and thus also a western blot expert), as well as Wollman and other Jessus investigators. New Sorbonne and CNRS Party doctrine is that data manipulation is definitely not research misconduct, but criticising that data manipulation is.

This is how Petit responded to the Jessus affair in public so far:

  • Called myself and other PubPeer commenters “arseholes” (in French connards) at his first meeting with the section heads of CNRS (one of whom is Jessus)
  • Claimed that PubPeer evidence and my reporting was an accusation of misconduct directed personally at Jessus and Peyroche (a lie, check my articles here and here), in this radio interview.
  • Described documented and now validated data integrity concerns raised against publications by Jessus and Peyroche as equivalent to false accusations of pederasty (then corrected to paedophilia), in same radio interview.
  • Announced to use IT surveillance technology to identify anonymous PubPeer commenters after their evidence was exposed as “wrong” (as it was in case of Jessus), in same radio interview.

Continue reading “Jessus investigator identity leaked, CNRS President to expose whistleblowers”

Yoshinori Watanabe data manipulations: much worse than officially presented

Yoshinori Watanabe data manipulations: much worse than officially presented

 

Earlier this months, a research misconduct scandal in molecular cell biology broke out in the big news. Yoshinori Watanabe, Japanese researcher of cell division and how cells separate their replicated DNA during mitosis and meiosis, was found guilty of scientific misconduct by his University of Tokyo (read the news here and here). This followed an investigation initiated in the fall of 2016, after anonymous whistleblowers submitted to the university a report accusing 6 Tokyo research groups of data manipulation, first and foremost, Watanabe (I managed to obtain this dossier, and publish it below).

As the outcome of the University of Tokyo investigations, which concluded on May 31st 2017, misconduct was determined in 5 publications from Watanabe’s lab, which appeared between 2008 and 2015 in the elite journals like Science, Nature and Nature Cell Biology. However, the whistleblower dossier lists 7 papers, one of them a paper in Cell from 2015 with duplicated gel images, and a 2011 EMBO Reports paper which contains a western blot which was obviously digitally retouched to remove unwanted bands. Watanabe’s assistant professor Yuji Tanno was also found guilty of misconduct, and indeed his 2015 Science paper with Watanabe looks like a total train wreck of data manipulations.  Yet it seems there is a tendency to present Watanabe’s deeds as mere mistakes (though grossly inappropriate ones) by a great genius scientist, who was confused by the complexity of rules on data acquisition and incidentally broke some while producing outstanding and absolutely reliable top-level research. Some of his peers seem to be calling for leniency or at least some understanding for Watanabe. The selected evidence from the whistleblower dossier which I post below suggests that Watanabe knew perfectly well what he was doing, and he did so in order to produce desirable results which his lab experiments failed to deliver, and which he needed in order to impress the choosy elite journals.

Continue reading “Yoshinori Watanabe data manipulations: much worse than officially presented”

Anil Sood and other questionable stars of MD Anderson

Anil Sood and other questionable stars of MD Anderson

The MD Anderson Cancer Center, part of the University of Texas and located in Houston, is a giant hub of huge cancer research money, even for US standards. They also do a lot of science there, which only purpose seems to be publishing in big journals in order to generate even more money. If there is any genuine interest to help cancer patients with actual research: this stands in a stark contrast with MD Anderson’s evident attitude to research reproducibility and data integrity. A number of their star researchers who published in most respectable journals papers, had their data flagged on the whistleblowing platform PubPeer as highly problematic. Yet MD Anderson apparently cannot care less. Their star cancer researcher and businessman Raghu Kalluri was never investigated for many problems in his publications, either in those with or those without his misconduct-tainted Portuguese co-author and ex-MD Anderson employee Sonia Melo. When nobody ever investigates your research practices (e.g., because your research institution is blinded by the investor money you brought in), you will per definition never be found guilty of any misconduct. This is probably exactly why the elite journal Nature recently accepted a new paper from the Kalluri lab (Kamerkar et al 2017), on the same topic of exosomes as cancer biomarkers as his irreproducible earlier masterpiece with Melo (Melo et al, Nature 2015). The new Nature paper even again features the same disgraced co-author, who lost a Nature Genetics paper (Melo et al, 2009) and her EMBO Young Investigator funding due to data manipulation.

There is more evidence for research misconduct at MD Anderson. Continue reading “Anil Sood and other questionable stars of MD Anderson”

Three retractions and lost court case for zombie Susana Gonzalez

Three retractions and lost court case for zombie Susana Gonzalez

The Spanish zombie scientist Susana González, former star of regenerative medicine and ageing research, now retracts two papers in Nature Communications, after she only recently retracted a paper in Cell Cycle. The responsibility for the absence of original data and data manipulations is with her. She also recently lost her court case against her sacking with the Centro Nacional de Investigaciones Cardiovasculares (CNIC) in Madrid, though this may go into the next court instance.  Her ERC research grant of €2 Million remains suspended. I previously reported about this and Gonzalez’s data integrity issues as well as her sacking from CNIC, and later on about her new job with Centro de Biología Molecular Severo Ochoa (CBMSO), also in Madrid. It seems at the present stage, Gonzalez is out on her ear of doing research, but certainly not out of being employed in academic research in Spain.  Continue reading “Three retractions and lost court case for zombie Susana Gonzalez”

Open Letter in support of my investigation of trachea transplants in Germany, by Rafael Cantera

Open Letter in support of my investigation of trachea transplants in Germany, by Rafael Cantera

Below a support letter by Rafael Cantera, professor of zoology at the University of Stockholm in Sweden, addressed to the leadership of the University Clinic Würzburg. This is because two professors of this German university, Thorsten Walles and Heike Mertsching (now Walles) chose to respond to my inquiries about their earlier trachea transplants made from pig intestine (see my detailed report here) with lawyers’ financial blackmail and right after, with court actions, which had me sentenced guilty with a  threat of a prison term of 6 months, without my prior knowledge (see case description here). Such are the peculiarities of German law: internet bloggers are basically  legally defined here by default as criminals, and professors as infallible and divine beings (in fact, even Walleses’ former boss and collaborator Paolo Macchiarini is still a protected adjunct professor at their former common place of work, the Medical University Hannover). I received lots of support from my readers, and was also invited to give an interview with the French magazine Mediapart (German version here). Now, I am deeply grateful to Prof. Cantera for his support, and hope other international and maybe even German academics join in and sign below.  Continue reading “Open Letter in support of my investigation of trachea transplants in Germany, by Rafael Cantera”

The western blot doctors of Silesia

The western blot doctors of Silesia

Protein expression analysis by western blots appears to be the weak spot of life science, because these blots are so often reported to be manipulated. However, this is only because anybody, even without any background in biology can spot re-used western blot bands, just using a good eye or some computer skills. Unlike with other analytical tools, like real-time PCR or microscopy imaging, you don’t need specialist knowledge or access to raw data to spot digital manipulations of western blots. One of the most famous western blot breeders is the Brazilian diabetes researcher Mario Saad (see whistleblower reports on my site here and here). Below is the case of his two colleagues from Poland.

Some time ago, I was contacted by a Polish scientist with a dossier of suspected western blot duplications in the publication of the pharmacologist Bożena Gabryel from the Department of Pharmacology at the Medical University of Silesia in Katowice, Poland. Gabryel specializes in oxidative stress research, four of her publications on this topic were accused to feature duplicated western blots, in different context. Sometimes suspicions were raised that selected individual bands in different western blots look too similar, which might suggest manipulative band duplications.

Soon after, another whistleblower independently contacted me with another dossier about yet another set of Gabryel’s papers, all featuring as lead or even corresponding author Krzysztof Łabuzek, who is an adjunct professor at this same Medical University  of Silesia with interest in immune system and who also has a clinical practice for internal medicine in a small town near Katowice. Labuzek’s papers seem to feature a whole gallery of re-used western blots, as the dossier suggests. Additionally, that second whistleblower expressed concerns about  western blot splicing and suspected band re-used in papers featuring the first author Joanna Ślusarczyk, PhD student in the lab of Agnieszka Basta-Kaim at the Polish Academy of Sciences in Krakow. Basta-Kaim is also co-author on one Gabryel paper now suspected of data manipulations.

Continue reading “The western blot doctors of Silesia”